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Peptidomics

Chapter 11 Protein Bioinformatics in Proteomics & Peptidomics, Volume 46: New Technology Platforms Elucidating Biology (Comprehensive Analytical Chemistry) by Gyorgy Marko-Varga (ISBN-13: 978-0444518101) Book at Amazon.com.

This chapter gives an overview over protein bioinformatics in general and protein structure bioinformatics more specifically.

Protein structure modeling

Chapter 5 Protein structure Modeling in Computational Biology, Volume 673: Methods in Molecular Biology, Springer Protocols, Humana Press, Edited by David Fenyo (ISBN-13: 978-1607618416) Book at Amazon.com.

This chapter describes how to model protein structures using online resources. For more information see Malmstrom, Lars; Goodlett, David; Protein structure modeling. Methods Mol Biol (2010), 673: 63-72..